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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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MCA1469Putative sigma-E factor regulatory protein; Identified by similarity to SP:P46186. (332 aa)    
Predicted Functional Partners:
mucC
Sigma factor regulator MucC; Identified by similarity to GP:1345103; match to protein family HMM PF04246.
  
  
 0.989
MCA1470
Conserved domain protein; Identified by similarity to GP:18496604.
  
 
 0.988
rpoE
RNA polymerase sigma-30 factor; Identified by similarity to SP:P34086; match to protein family HMM PF04542; match to protein family HMM PF04545; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.960
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
 
    0.804
MCA1464
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.703
lepA
GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
       0.672
MCA1467
Serine protease, MucD; Identified by similarity to GP:1345104; match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037; Belongs to the peptidase S1C family.
  
  
 0.670
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
       0.657
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
       0.657
lepB
Signal peptidase I; Identified by similarity to SP:P00803; match to protein family HMM PF00717; match to protein family HMM TIGR02227; Belongs to the peptidase S26 family.
       0.657
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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