STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA1503Putative membrane protein; Identified by similarity to OMNI:NTL03PA04934. (300 aa)    
Predicted Functional Partners:
MCA1502
Identified by match to protein family HMM PF01694.
       0.786
MCA1499
Glycolate oxidase, iron-sulfur subunit; Identified by similarity to SP:P52074; match to protein family HMM PF00037; match to protein family HMM PF02754.
       0.740
glcE
Glycolate oxidase, GlcE subunit; Identified by similarity to SP:P52073; match to protein family HMM PF01565.
       0.740
glcD
Glycolate oxidase, GlcD subunit; Identified by similarity to SP:P52075; match to protein family HMM PF01565; match to protein family HMM PF02913.
       0.732
MCA2439
Putative cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.684
MCA2081
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.643
MCA1870
ribD C-terminal domain protein.
  
     0.627
MCA3053
Conserved hypothetical protein; Identified by similarity to OMNI:NTL03PA04524; match to protein family HMM PF07793.
  
     0.620
MCA2601
Identified by similarity to GP:4008541; match to protein family HMM PF03372.
  
     0.610
MCA0340
Putative membrane protein; Identified by similarity to GP:17133197.
  
     0.581
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.