MCA1523 protein (Methylococcus capsulatus) - STRING interaction network

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Score

MCA1523

Cold shock protein; Identified by similarity to SP:P41016; match to protein family HMM PF00313. (69 aa)

Predicted Functional Partners:

MCA1522

0.536

MCA1524

0.518

hepA

0.506

rpoZ

0.490

rpoB

0.485

rpoA

0.470

MCA0793

0.434

MCA1010

0.434

rpmE

0.425

rpsL

0.425

Your Current Organism:

Methylococcus capsulatus

NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MCA0793	MCA1523	MCA0793	MCA1523	RNA-binding protein; Identified by similarity to GP:2624328; match to protein family HMM PF00076.	Cold shock protein; Identified by similarity to SP:P41016; match to protein family HMM PF00313.	0.434
MCA0793	hepA	MCA0793	MCA2531	RNA-binding protein; Identified by similarity to GP:2624328; match to protein family HMM PF00076.	RNA polymerase-associated protein HepA; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily.	0.548
MCA0793	rpoA	MCA0793	MCA2347	RNA-binding protein; Identified by similarity to GP:2624328; match to protein family HMM PF00076.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.762
MCA0793	rpoB	MCA0793	MCA1066	RNA-binding protein; Identified by similarity to GP:2624328; match to protein family HMM PF00076.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.757
MCA0793	rpoZ	MCA0793	MCA2022	RNA-binding protein; Identified by similarity to GP:2624328; match to protein family HMM PF00076.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.749
MCA1010	MCA1523	MCA1010	MCA1523	RNA-binding protein; Identified by similarity to GP:1666299; match to protein family HMM PF00076.	Cold shock protein; Identified by similarity to SP:P41016; match to protein family HMM PF00313.	0.434
MCA1010	hepA	MCA1010	MCA2531	RNA-binding protein; Identified by similarity to GP:1666299; match to protein family HMM PF00076.	RNA polymerase-associated protein HepA; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily.	0.548
MCA1010	rpoA	MCA1010	MCA2347	RNA-binding protein; Identified by similarity to GP:1666299; match to protein family HMM PF00076.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.762
MCA1010	rpoB	MCA1010	MCA1066	RNA-binding protein; Identified by similarity to GP:1666299; match to protein family HMM PF00076.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.757
MCA1010	rpoZ	MCA1010	MCA2022	RNA-binding protein; Identified by similarity to GP:1666299; match to protein family HMM PF00076.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.749
MCA1522	MCA1523	MCA1522	MCA1523	Identified by similarity to SP:P37695; match to protein family HMM PF01648; Belongs to the P-Pant transferase superfamily.	Cold shock protein; Identified by similarity to SP:P41016; match to protein family HMM PF00313.	0.536
MCA1523	MCA0793	MCA1523	MCA0793	Cold shock protein; Identified by similarity to SP:P41016; match to protein family HMM PF00313.	RNA-binding protein; Identified by similarity to GP:2624328; match to protein family HMM PF00076.	0.434
MCA1523	MCA1010	MCA1523	MCA1010	Cold shock protein; Identified by similarity to SP:P41016; match to protein family HMM PF00313.	RNA-binding protein; Identified by similarity to GP:1666299; match to protein family HMM PF00076.	0.434
MCA1523	MCA1522	MCA1523	MCA1522	Cold shock protein; Identified by similarity to SP:P41016; match to protein family HMM PF00313.	Identified by similarity to SP:P37695; match to protein family HMM PF01648; Belongs to the P-Pant transferase superfamily.	0.536
MCA1523	MCA1524	MCA1523	MCA1524	Cold shock protein; Identified by similarity to SP:P41016; match to protein family HMM PF00313.	Hypothetical protein; Identified by Glimmer2; putative.	0.518
MCA1523	hepA	MCA1523	MCA2531	Cold shock protein; Identified by similarity to SP:P41016; match to protein family HMM PF00313.	RNA polymerase-associated protein HepA; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily.	0.506
MCA1523	rpmE	MCA1523	MCA0322	Cold shock protein; Identified by similarity to SP:P41016; match to protein family HMM PF00313.	Ribosomal protein L31; Binds the 23S rRNA.	0.425
MCA1523	rpoA	MCA1523	MCA2347	Cold shock protein; Identified by similarity to SP:P41016; match to protein family HMM PF00313.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.470
MCA1523	rpoB	MCA1523	MCA1066	Cold shock protein; Identified by similarity to SP:P41016; match to protein family HMM PF00313.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.485
MCA1523	rpoZ	MCA1523	MCA2022	Cold shock protein; Identified by similarity to SP:P41016; match to protein family HMM PF00313.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.490

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