Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
bglBeta-glucosidase; Identified by similarity to SP:Q08638; match to protein family HMM PF00232. (450 aa)    
Predicted Functional Partners:
MCA0942
Putative oligo-1,6-glucosidase; Identified by similarity to PIR:JE0181; match to protein family HMM PF00128.
 
 
 0.947
MCA1577
Conserved domain protein.
       0.746
MCA1579
ATP-dependent RNA helicase, DEAD/DEAH box family; Identified by similarity to SP:P30015; match to protein family HMM PF00270; match to protein family HMM PF00271.
       0.689
MCA2161
Hypothetical protein; Identified by Glimmer2; putative.
   
 
 0.592
MCA2930
Putative prophage MuMc02, head decoration protein.
   
   0.570
MCA0769
Pyruvate ferredoxin/flavodoxin oxidoreductase family protein; Identified by similarity to SP:P52647; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM PF02775; match to protein family HMM TIGR02176.
      
 0.466
MCA0041
Oxidoreductase, Gfo/Idh/MocA family; Identified by similarity to OMNI:NTL01BH3849; match to protein family HMM PF01408; match to protein family HMM PF02894.
  
    0.433
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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