MCA1581 protein (Methylococcus capsulatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

MCA1581

Identified by match to protein family HMM PF00909. (433 aa)

Predicted Functional Partners:

MCA2137

0.963

MCA2044

0.958

MCA0337

0.787

MCA1237

0.774

MCA0461

0.726

MCA3081

0.708

gltB

0.694

MCA1204

0.667

MCA0283

0.603

MCA1580

0.572

Your Current Organism:

Methylococcus capsulatus

NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MCA0283	MCA1581	MCA0283	MCA1581	Putative nitrogen regulatory protein P-II; Identified by match to protein family HMM PF00543.	Identified by match to protein family HMM PF00909.	0.603
MCA0283	gltB	MCA0283	MCA2039	Putative nitrogen regulatory protein P-II; Identified by match to protein family HMM PF00543.	Glutamate synthase, large subunit; Identified by similarity to SP:P39812; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04897; match to protein family HMM PF04898.	0.545
MCA0337	MCA1204	MCA0337	MCA1204	EAL/GGDEF domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	0.877
MCA0337	MCA1581	MCA0337	MCA1581	EAL/GGDEF domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	Identified by match to protein family HMM PF00909.	0.787
MCA0461	MCA1204	MCA0461	MCA1204	CBS/GGDEF/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00571; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	0.858
MCA0461	MCA1581	MCA0461	MCA1581	CBS/GGDEF/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00571; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	Identified by match to protein family HMM PF00909.	0.726
MCA1204	MCA0337	MCA1204	MCA0337	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	EAL/GGDEF domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.877
MCA1204	MCA0461	MCA1204	MCA0461	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	CBS/GGDEF/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00571; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.858
MCA1204	MCA1237	MCA1204	MCA1237	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	Sensory box protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF07453; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	0.977
MCA1204	MCA1581	MCA1204	MCA1581	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	Identified by match to protein family HMM PF00909.	0.667
MCA1204	MCA3081	MCA1204	MCA3081	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	Sensory box protein/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563; match to protein family HMM PF00785; match to protein family HMM PF00990; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	0.955
MCA1204	gltB	MCA1204	MCA2039	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	Glutamate synthase, large subunit; Identified by similarity to SP:P39812; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04897; match to protein family HMM PF04898.	0.597
MCA1237	MCA1204	MCA1237	MCA1204	Sensory box protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF07453; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	0.977
MCA1237	MCA1581	MCA1237	MCA1581	Sensory box protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF07453; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	Identified by match to protein family HMM PF00909.	0.774
MCA1237	MCA3081	MCA1237	MCA3081	Sensory box protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF07453; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	Sensory box protein/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563; match to protein family HMM PF00785; match to protein family HMM PF00990; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	0.811
MCA1580	MCA1581	MCA1580	MCA1581	ISMca1, transposase; Identified by match to protein family HMM PF01609.	Identified by match to protein family HMM PF00909.	0.572
MCA1581	MCA0283	MCA1581	MCA0283	Identified by match to protein family HMM PF00909.	Putative nitrogen regulatory protein P-II; Identified by match to protein family HMM PF00543.	0.603
MCA1581	MCA0337	MCA1581	MCA0337	Identified by match to protein family HMM PF00909.	EAL/GGDEF domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.787
MCA1581	MCA0461	MCA1581	MCA0461	Identified by match to protein family HMM PF00909.	CBS/GGDEF/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00571; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.726
MCA1581	MCA1204	MCA1581	MCA1204	Identified by match to protein family HMM PF00909.	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	0.667

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