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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA1590Conserved hypothetical protein; Identified by similarity to OMNI:NTL03PA00938. (181 aa)    
Predicted Functional Partners:
MCA2982
Hydrolase, haloacid dehalogenase-like family; Identified by similarity to OMNI:NTL03PA05178; match to protein family HMM PF00702; match to protein family HMM TIGR01509.
  
     0.642
MCA1588
Hypothetical protein; Identified by Glimmer2; putative.
       0.639
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
       0.639
MCA2771
Conserved hypothetical protein; Identified by similarity to SP:Q9HTW5; match to protein family HMM TIGR02292; Belongs to the UPF0149 family.
  
     0.624
MCA2528
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01XF01262.
  
     0.574
MCA1672
Putative penicillin-binding protein; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits).
  
     0.542
MCA1591
Hypothetical protein; Identified by Glimmer2; putative.
       0.538
MCA0665
Putative glycine cleavage system transcriptional repressor; Identified by similarity to SP:P23483.
  
     0.508
MCA1587
Xylulose-5-phosphate/fructose-6-phosphate phosphoketolase; Identified by similarity to SP:Q9AEM9; match to protein family HMM PF03894.
       0.493
rnt
Ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis.
  
     0.454
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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