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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA1641Conserved hypothetical protein; Identified by similarity to GP:17431966. (651 aa)    
Predicted Functional Partners:
MCA1640
Putative nodulation protein nolNO; Identified by similarity to SP:P55474; match to protein family HMM PF02543.
 
     0.908
MCA1639
Fatty acid desaturase domain protein; Identified by match to protein family HMM PF00487.
 
     0.839
MCA1689
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.700
MCA0943
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.678
MCA0083
Methyltransferase, UbiE/COQ5 family; Identified by similarity to OMNI:NTL01SS01907.
  
     0.651
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.648
MCA2718
Conserved hypothetical protein; Identified by similarity to GP:1785478.
  
     0.636
MCA1460
Conserved hypothetical protein; Identified by similarity to OMNI:NTL03PA01119.
  
    0.629
MCA2510
Putative lipoprotein.
  
     0.598
MCA1946
Putative lipoprotein.
  
     0.594
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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