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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ispZIntracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family. (177 aa)    
Predicted Functional Partners:
bolA
bolA protein; Identified by similarity to SP:P15298; match to protein family HMM PF01722; Belongs to the BolA/IbaG family.
  
    0.831
MCA1645
Conserved hypothetical protein; Identified by similarity to OMNI:NTL03PA03202; match to protein family HMM PF03795.
       0.817
MCA1643
Peptidyl-prolyl cis-trans isomerase family protein; Identified by match to protein family HMM PF00639.
       0.800
MCA1647
Conserved hypothetical protein; Identified by similarity to OMNI:NTL03PA03440.
       0.545
cmoA
Putative methyltransferase; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM).
   
    0.485
MCA1256
Conserved hypothetical protein; Identified by similarity to GP:17427469; match to protein family HMM PF04280.
  
    0.449
MCA0600
Conserved hypothetical protein; Identified by similarity to GP:4545243.
  
     0.400
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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