MCA1675 protein (Methylococcus capsulatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

MCA1675

ABC transporter, permease family protein; Identified by match to protein family HMM PF00664. (571 aa)

Predicted Functional Partners:

MCA0717

0.560

MCA0553

0.509

gabD

0.505

MCA0908

0.485

recA

0.474

hypE

0.454

MCA1674

0.442

MCA2643

0.440

MCA1006

0.433

MCA0262

0.417

Your Current Organism:

Methylococcus capsulatus

NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MCA0262	MCA1675	MCA0262	MCA1675	ATPase, AAA family; Identified by match to protein family HMM PF00004.	ABC transporter, permease family protein; Identified by match to protein family HMM PF00664.	0.417
MCA0262	recA	MCA0262	MCA0387	ATPase, AAA family; Identified by match to protein family HMM PF00004.	recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	0.505
MCA0553	MCA0717	MCA0553	MCA0717	Discoidin domain protein; Identified by similarity to GP:9107638; match to protein family HMM PF00754; match to protein family HMM PF01851.	Putative lipoprotein; Identified by similarity to GP:17430383.	0.733
MCA0553	MCA1675	MCA0553	MCA1675	Discoidin domain protein; Identified by similarity to GP:9107638; match to protein family HMM PF00754; match to protein family HMM PF01851.	ABC transporter, permease family protein; Identified by match to protein family HMM PF00664.	0.509
MCA0717	MCA0553	MCA0717	MCA0553	Putative lipoprotein; Identified by similarity to GP:17430383.	Discoidin domain protein; Identified by similarity to GP:9107638; match to protein family HMM PF00754; match to protein family HMM PF01851.	0.733
MCA0717	MCA1675	MCA0717	MCA1675	Putative lipoprotein; Identified by similarity to GP:17430383.	ABC transporter, permease family protein; Identified by match to protein family HMM PF00664.	0.560
MCA0908	MCA1675	MCA0908	MCA1675	ATPase, AAA family; Identified by match to protein family HMM PF00004.	ABC transporter, permease family protein; Identified by match to protein family HMM PF00664.	0.485
MCA0908	recA	MCA0908	MCA0387	ATPase, AAA family; Identified by match to protein family HMM PF00004.	recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	0.505
MCA1006	MCA1675	MCA1006	MCA1675	Acyltransferase family protein; Identified by similarity to OMNI:NTL01AA00691; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF01553.	ABC transporter, permease family protein; Identified by match to protein family HMM PF00664.	0.433
MCA1006	gabD	MCA1006	MCA1756	Acyltransferase family protein; Identified by similarity to OMNI:NTL01AA00691; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF01553.	Succinate-semialdehyde dehydrogenase (NADP+); Identified by similarity to SP:P25526; match to protein family HMM PF00171; match to protein family HMM TIGR01780; Belongs to the aldehyde dehydrogenase family.	0.597
MCA1006	recA	MCA1006	MCA0387	Acyltransferase family protein; Identified by similarity to OMNI:NTL01AA00691; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF01553.	recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	0.573
MCA1674	MCA1675	MCA1674	MCA1675	Putative methyl-accepting chemotaxis protein; Identified by similarity to SP:P39216; match to protein family HMM PF00015; match to protein family HMM PF00672.	ABC transporter, permease family protein; Identified by match to protein family HMM PF00664.	0.442
MCA1675	MCA0262	MCA1675	MCA0262	ABC transporter, permease family protein; Identified by match to protein family HMM PF00664.	ATPase, AAA family; Identified by match to protein family HMM PF00004.	0.417
MCA1675	MCA0553	MCA1675	MCA0553	ABC transporter, permease family protein; Identified by match to protein family HMM PF00664.	Discoidin domain protein; Identified by similarity to GP:9107638; match to protein family HMM PF00754; match to protein family HMM PF01851.	0.509
MCA1675	MCA0717	MCA1675	MCA0717	ABC transporter, permease family protein; Identified by match to protein family HMM PF00664.	Putative lipoprotein; Identified by similarity to GP:17430383.	0.560
MCA1675	MCA0908	MCA1675	MCA0908	ABC transporter, permease family protein; Identified by match to protein family HMM PF00664.	ATPase, AAA family; Identified by match to protein family HMM PF00004.	0.485
MCA1675	MCA1006	MCA1675	MCA1006	ABC transporter, permease family protein; Identified by match to protein family HMM PF00664.	Acyltransferase family protein; Identified by similarity to OMNI:NTL01AA00691; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF01553.	0.433
MCA1675	MCA1674	MCA1675	MCA1674	ABC transporter, permease family protein; Identified by match to protein family HMM PF00664.	Putative methyl-accepting chemotaxis protein; Identified by similarity to SP:P39216; match to protein family HMM PF00015; match to protein family HMM PF00672.	0.442
MCA1675	MCA2643	MCA1675	MCA2643	ABC transporter, permease family protein; Identified by match to protein family HMM PF00664.	Conserved hypothetical protein; Identified by similarity to GP:17427847.	0.440
MCA1675	gabD	MCA1675	MCA1756	ABC transporter, permease family protein; Identified by match to protein family HMM PF00664.	Succinate-semialdehyde dehydrogenase (NADP+); Identified by similarity to SP:P25526; match to protein family HMM PF00171; match to protein family HMM TIGR01780; Belongs to the aldehyde dehydrogenase family.	0.505

page 1 of 2

Server load: low (12%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About