STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA1827Conserved hypothetical protein; Identified by similarity to GP:12698380. (174 aa)    
Predicted Functional Partners:
MCA0338
Cytochrome c5530 family protein; Identified by similarity to GP:4325062.
  
     0.658
MCA2285
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.583
MCA0647
Identified by match to protein family HMM PF07885.
  
     0.577
MCA1828
Dinitrogenase reductase ADP-ribosyltransferase-like protein; Identified by similarity to SP:P14299.
       0.561
MCA1903
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01AA00874.
  
     0.540
mmoY
Methane monooxygenase, A subunit, beta chain; Responsible for the initial oxygenation of methane to methanol in methanotrophs. It also catalyzes the monohydroxylation of a variety of unactivated alkenes, alicyclic, aromatic and heterocyclic compounds.
  
     0.534
MCA1825
Conserved hypothetical protein; Identified by similarity to GP:17131822.
 
     0.517
MCA2834
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01MT00914.
  
     0.510
MCA0471
Identified by match to protein family HMM PF02366.
  
     0.507
mmoX
Methane monooxygenase, A subunit, alpha chain; Responsible for the initial oxygenation of methane to methanol in methanotrophs. It also catalyzes the monohydroxylation of a variety of unactivated alkenes, alicyclic, aromatic and heterocyclic compounds; Belongs to the TmoA/XamoA family.
  
     0.505
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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