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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA1835Hypothetical protein; Identified by Glimmer2; putative. (146 aa)    
Predicted Functional Partners:
MCA1833
Conserved hypothetical protein; Identified by similarity to GP:18891930; match to protein family HMM PF07755.
       0.757
MCA1834
Putative chloromuconate cycloisomerase; Catalyzes the epimerization of L-Lys-L-Arg to L-Lys-D-Arg. Can also catalyze the epimerization of other cationic dipeptides, such as L-Arg-L-Arg, L-Lys-L-Lys and L-Lys-L-His, but with lower efficiency (in vitro); Belongs to the mandelate racemase/muconate lactonizing enzyme family.
       0.757
sfcA
Malate oxidoreductase; Identified by similarity to SP:P26616; match to protein family HMM PF00390; match to protein family HMM PF03949.
       0.570
ilvK
Acetolactate synthase; Identified by similarity to SP:Q04789; match to protein family HMM PF00205; match to protein family HMM PF02776; match to protein family HMM TIGR02418; Belongs to the TPP enzyme family.
       0.510
MCA2180
Putative TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.
  
     0.484
budA
Alpha-acetolactate decarboxylase; Converts acetolactate into acetoin.
       0.475
MCA0346
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.474
clpX-3
ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
       0.456
cysE-1
Serine acetyltransferase; Identified by similarity to SP:P74089; match to protein family HMM PF00132; match to protein family HMM TIGR01172.
       0.456
MCA1831
Hypothetical protein; Identified by Glimmer2; putative.
       0.456
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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