STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA1842Conserved hypothetical protein; Identified by similarity to OMNI:NTL01PM1824. (653 aa)    
Predicted Functional Partners:
MCA1840
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01PM1826; match to protein family HMM PF02687.
    0.979
MCA1841
ABC transporter, ATP-binding family protein; Identified by similarity to OMNI:NTL03PA00074; match to protein family HMM PF00005.
  
 0.968
MCA1844
Conserved hypothetical protein; Identified by similarity to GP:15980287.
 
    0.953
MCA1845
Conserved hypothetical protein; Identified by similarity to GB:AAK03903.1.
 
     0.952
MCA1846
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01PM1820.
 
    0.941
MCA2146
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01PM1827; match to protein family HMM PF03781.
 
  
 0.847
MCA1843
Hypothetical protein; Identified by Glimmer2; putative.
       0.799
MCA1539
Conserved domain protein; Identified by similarity to OMNI:NTL01PM1830.
 
     0.797
MCA0593
Identified by similarity to GP:4557191; match to protein family HMM PF00069; match to protein family HMM PF00481.
 
 
 0.511
MCA1839
Putative lipoprotein; Identified by similarity to GP:17428896.
       0.499
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.