Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cax-2Calcium/proton exchanger; Ca(+)/H(+) antiporter that extrudes calcium in exchange for external protons. (361 aa)    
Predicted Functional Partners:
MCA1911
Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525.
 
   
 0.715
MCA1915
Cation-transporting ATPase, E1-E2 family; Identified by match to protein family HMM PF00122.
     
 0.673
MCA1900
Cation efflux family protein; Identified by similarity to GP:15025562; match to protein family HMM PF01545; match to protein family HMM TIGR01297.
    
 
 0.650
MCA1238
Polyketide synthase; Identified by similarity to GP:24575128; match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01590; match to protein family HMM PF02801.
   
  
 0.646
MCA1237
Sensory box protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF07453; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.
      
 0.618
MCA1522
Identified by similarity to SP:P37695; match to protein family HMM PF01648; Belongs to the P-Pant transferase superfamily.
      
 0.618
MCA1908
Hypothetical protein; Identified by Glimmer2; putative.
       0.489
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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