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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA1946Putative lipoprotein. (154 aa)    
Predicted Functional Partners:
MCA1947
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SMB00166.
 
     0.770
MCA1689
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.745
MCA0297
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SMB00167.
 
     0.725
MCA0317
Selenium-binding family protein; Identified by similarity to SP:Q63836.
  
    0.700
MCA0524
Cytochrome P460; Identified by similarity to GP:3659895.
  
     0.671
MCA2115
Transglycosylase SLT domain protein; Identified by match to protein family HMM PF01464.
  
     0.642
MCA1641
Conserved hypothetical protein; Identified by similarity to GP:17431966.
  
     0.594
MCA0318
Putative SCO1/SenC family protein/methylamine utilization protein MauG; Identified by similarity to SP:Q49128; match to protein family HMM PF03150.
  
     0.585
mobA
Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.
       0.584
MCA2510
Putative lipoprotein.
  
     0.549
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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