close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA2081Hypothetical protein; Identified by Glimmer2; putative. (187 aa)    
Predicted Functional Partners:
MCA1366
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.752
MCA2036
Putative membrane protein; Identified by similarity to OMNI:NTL03PA04934.
  
     0.739
argE
Acetylornithine deacetylase; Identified by similarity to SP:P23908; match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01892.
 
    0.680
ilvD
Dihydroxy-acid dehydratase; Identified by similarity to SP:P51785; match to protein family HMM PF00920; match to protein family HMM TIGR00110; Belongs to the IlvD/Edd family.
       0.679
MCA2739
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.667
MCA1503
Putative membrane protein; Identified by similarity to OMNI:NTL03PA04934.
  
     0.643
MCA1966
STAS domain protein; Identified by match to protein family HMM PF01740.
  
     0.637
argA
N-acetylglutamate synthase; Identified by similarity to SP:P08205; match to protein family HMM PF00583; match to protein family HMM PF00696; match to protein family HMM TIGR01890; Belongs to the acetyltransferase family. ArgA subfamily.
       0.620
MCA2528
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01XF01262.
  
    0.614
MCA0564
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.601
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.