STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA2102Conserved hypothetical protein; Identified by similarity to OMNI:NTL03PA03826; match to protein family HMM PF06271. (147 aa)    
Predicted Functional Partners:
petC
Ubiquinol--cytochrome c reductase, cytochrome c1; Identified by similarity to SP:P08501; match to protein family HMM PF02167.
  
     0.727
MCA2103
Hypothetical protein; Identified by Glimmer2; putative.
       0.723
petA
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
     0.695
MCA2603
Cytochrome c family protein; Identified by similarity to SP:P43302; match to protein family HMM PF00034.
  
     0.656
hslR
Heat shock protein 15; Identified by similarity to SP:P45802; match to protein family HMM PF01479; Belongs to the HSP15 family.
   
    0.642
MCA2626
Conserved hypothetical protein; Identified by similarity to OMNI:VC1880.
  
     0.592
petB
Ubiquinol--cytochrome c reductase, cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
     0.578
MCA1095
Putative membrane protein; Identified by similarity to OMNI:NTL03PA01548.
  
     0.486
MCA1185
Cytochrome c family protein; Identified by similarity to OMNI:NTL03PA02482; match to protein family HMM PF00034.
  
     0.476
MCA0132
Conserved hypothetical protein; Identified by similarity to OMNI:NTL03PA00112.
  
     0.470
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.