Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| MCA0466 | mltB | MCA0466 | MCA2114 | Identified by match to protein family HMM PF01841. | Membrane-bound lytic transglycosylase B; Identified by similarity to SP:P41052; match to protein family HMM TIGR02282. | 0.418 |
| MCA0521 | mltB | MCA0521 | MCA2114 | Conserved hypothetical protein; Identified by similarity to OMNI:NTL01ST1808; match to protein family HMM PF05779; Belongs to the UPF0260 family. | Membrane-bound lytic transglycosylase B; Identified by similarity to SP:P41052; match to protein family HMM TIGR02282. | 0.426 |
| MCA2115 | mltB | MCA2115 | MCA2114 | Transglycosylase SLT domain protein; Identified by match to protein family HMM PF01464. | Membrane-bound lytic transglycosylase B; Identified by similarity to SP:P41052; match to protein family HMM TIGR02282. | 0.618 |
| lptD | mltB | MCA0601 | MCA2114 | Putative organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | Membrane-bound lytic transglycosylase B; Identified by similarity to SP:P41052; match to protein family HMM TIGR02282. | 0.431 |
| mltB | MCA0466 | MCA2114 | MCA0466 | Membrane-bound lytic transglycosylase B; Identified by similarity to SP:P41052; match to protein family HMM TIGR02282. | Identified by match to protein family HMM PF01841. | 0.418 |
| mltB | MCA0521 | MCA2114 | MCA0521 | Membrane-bound lytic transglycosylase B; Identified by similarity to SP:P41052; match to protein family HMM TIGR02282. | Conserved hypothetical protein; Identified by similarity to OMNI:NTL01ST1808; match to protein family HMM PF05779; Belongs to the UPF0260 family. | 0.426 |
| mltB | MCA2115 | MCA2114 | MCA2115 | Membrane-bound lytic transglycosylase B; Identified by similarity to SP:P41052; match to protein family HMM TIGR02282. | Transglycosylase SLT domain protein; Identified by match to protein family HMM PF01464. | 0.618 |
| mltB | lptD | MCA2114 | MCA0601 | Membrane-bound lytic transglycosylase B; Identified by similarity to SP:P41052; match to protein family HMM TIGR02282. | Putative organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | 0.431 |
| mltB | mrdA | MCA2114 | MCA0103 | Membrane-bound lytic transglycosylase B; Identified by similarity to SP:P41052; match to protein family HMM TIGR02282. | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.560 |
| mltB | pepN | MCA2114 | MCA0774 | Membrane-bound lytic transglycosylase B; Identified by similarity to SP:P41052; match to protein family HMM TIGR02282. | Identified by similarity to SP:P04825; match to protein family HMM PF01433; match to protein family HMM TIGR02414. | 0.439 |
| mltB | secB | MCA2114 | MCA2537 | Membrane-bound lytic transglycosylase B; Identified by similarity to SP:P41052; match to protein family HMM TIGR02282. | Protein-export protein SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. | 0.503 |
| mrdA | mltB | MCA0103 | MCA2114 | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | Membrane-bound lytic transglycosylase B; Identified by similarity to SP:P41052; match to protein family HMM TIGR02282. | 0.560 |
| pepN | mltB | MCA0774 | MCA2114 | Identified by similarity to SP:P04825; match to protein family HMM PF01433; match to protein family HMM TIGR02414. | Membrane-bound lytic transglycosylase B; Identified by similarity to SP:P41052; match to protein family HMM TIGR02282. | 0.439 |
| secB | mltB | MCA2537 | MCA2114 | Protein-export protein SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. | Membrane-bound lytic transglycosylase B; Identified by similarity to SP:P41052; match to protein family HMM TIGR02282. | 0.503 |