Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MCA2121ABC transporter, permease protein; Identified by match to protein family HMM PF01061. (254 aa)    
Predicted Functional Partners:
MCA2122
ABC transporter, ATP-binding protein; Identified by similarity to SP:P36879; match to protein family HMM PF00005.
  
 0.967
MCA1484
Carbohydrate efflux ABC transporter, ATP-binding protein, NodI family; Identified by similarity to SP:P72335; match to protein family HMM PF00005.
  
 0.509
MCA2123
Ppx/GppA phosphatase; Identified by match to protein family HMM PF02541; Belongs to the GppA/Ppx family.
       0.509
MCA1399
Putative ABC transporter, permease protein; Gene cluster supports this as an ABC transporter component; identified by match to protein family HMM PF02687.
  
  
  0.464
MCA1483
Carbohydrate efflux ABC transporter, permease protein, NodJ family; Identified by similarity to SP:P55475; match to protein family HMM PF01061; match to protein family HMM TIGR01291.
 
  
 
0.462
MCA1280
ABC transporter, ATP-binding protein; Identified by similarity to OMNI:NTL01SMB00184; match to protein family HMM PF00005.
  
 0.403
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.