close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA2169BNR repeat domain protein; Identified by match to protein family HMM PF02012. (459 aa)    
Predicted Functional Partners:
MCA2170
Putative copper resistance protein; Identified by similarity to SP:P12376; match to protein family HMM PF04234.
 
     0.918
MCA1289
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.642
MCA1695
Putative cell division protein FtsK; Identified by similarity to SP:P46889; match to protein family HMM PF01580.
    
 
 0.613
MCA1701
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.595
MCA2180
Putative TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.
 
     0.570
MCA1084
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.542
MCA2112
Conserved hypothetical protein; Identified by similarity to GP:4378852.
  
     0.534
MCA2477
Conserved hypothetical protein; Identified by similarity to SP:P37512; match to protein family HMM PF03190.
    
   0.529
MCA1631
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.498
MCA2718
Conserved hypothetical protein; Identified by similarity to GP:1785478.
  
    0.491
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.