STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA2181Identified by match to protein family HMM PF00034. (270 aa)    
Predicted Functional Partners:
petC
Ubiquinol--cytochrome c reductase, cytochrome c1; Identified by similarity to SP:P08501; match to protein family HMM PF02167.
  
 
 0.880
MCA2603
Cytochrome c family protein; Identified by similarity to SP:P43302; match to protein family HMM PF00034.
  
 
 
 0.821
MCA1068
Cytochrome c family protein; Identified by similarity to SP:Q52369; match to protein family HMM PF00034.
  
 
 
 0.765
MCA0879
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.712
MCA0940
Cytochrome c family protein; Identified by similarity to GP:15979130; match to protein family HMM PF00034.
  
 
 
 0.709
MCA0318
Putative SCO1/SenC family protein/methylamine utilization protein MauG; Identified by similarity to SP:Q49128; match to protein family HMM PF03150.
 
   
 0.673
MCA2405
Cytochrome c family protein; Identified by similarity to SP:P95339; match to protein family HMM PF00034.
  
   
 0.671
MCA2590
Putative cytochrome c peroxidase family protein.
  
   
 0.668
MCA1185
Cytochrome c family protein; Identified by similarity to OMNI:NTL03PA02482; match to protein family HMM PF00034.
  
 
 
 0.657
MCA0524
Cytochrome P460; Identified by similarity to GP:3659895.
   
 
 0.655
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.