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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA2398Hypothetical protein; Identified by Glimmer2; putative. (57 aa)    
Predicted Functional Partners:
MCA2395
Cytochrome c family protein; Identified by similarity to SP:P43302; match to protein family HMM PF00034.
       0.773
MCA2396
Cytochrome c oxidase, subunit I; Identified by similarity to GP:4001615; match to protein family HMM PF00115.
       0.773
MCA2397
Cytochrome c oxidase, subunit II; Identified by similarity to SP:P98052.
       0.773
MCA2399
Putative cytochrome c oxidase, CbaD subunit; Identified by similarity to GP:2182019.
       0.773
MCA2400
Putative nitric-oxide reductase, B subunit; Identified by similarity to SP:P98008.
       0.601
MCA2401
Conserved domain protein; Identified by similarity to OMNI:NTL01ATA0505.
       0.601
ccp
Cytochrome c; Identified by similarity to GP:5070630.
       0.437
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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