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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA2401Conserved domain protein; Identified by similarity to OMNI:NTL01ATA0505. (200 aa)    
Predicted Functional Partners:
MCA2400
Putative nitric-oxide reductase, B subunit; Identified by similarity to SP:P98008.
 
 0.999
cbbQ
cbbQ protein; Identified by similarity to GP:4105515; match to protein family HMM PF07728.
 
    0.924
cbbO
cbbO protein; Identified by similarity to GP:4433775; match to protein family HMM PF00092.
 
  
 0.912
MCA2397
Cytochrome c oxidase, subunit II; Identified by similarity to SP:P98052.
 
 
 0.826
MCA2396
Cytochrome c oxidase, subunit I; Identified by similarity to GP:4001615; match to protein family HMM PF00115.
 
 
 0.822
petA
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.797
petB
Ubiquinol--cytochrome c reductase, cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.778
MCA0883
Cytochrome c oxidase, subunit III; Identified by similarity to OMNI:NTL03PA00109; match to protein family HMM PF00510.
  
 
 0.767
MCA2395
Cytochrome c family protein; Identified by similarity to SP:P43302; match to protein family HMM PF00034.
 
    0.665
MCA2405
Cytochrome c family protein; Identified by similarity to SP:P95339; match to protein family HMM PF00034.
  
  
 0.612
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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