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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA2405Cytochrome c family protein; Identified by similarity to SP:P95339; match to protein family HMM PF00034. (105 aa)    
Predicted Functional Partners:
MCA1504
Putative sulfite oxidase SoxC; Identified by similarity to GP:7381242; match to protein family HMM PF00174; match to protein family HMM PF02012; match to protein family HMM PF03404; match to protein family HMM TIGR01409.
   
 
 0.784
msrP
Tat (twin-arginine translocation) pathway signal sequence domain protein; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-st [...]
   
 
 0.683
MCA0318
Putative SCO1/SenC family protein/methylamine utilization protein MauG; Identified by similarity to SP:Q49128; match to protein family HMM PF03150.
 
  
 0.650
MCA2401
Conserved domain protein; Identified by similarity to OMNI:NTL01ATA0505.
  
  
 0.612
MCA2400
Putative nitric-oxide reductase, B subunit; Identified by similarity to SP:P98008.
  
  
 0.607
MCA1279
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SMB00179; match to protein family HMM TIGR02276.
  
  
 0.573
MCA2380
Conserved hypothetical protein; Identified by similarity to GP:19915811; match to protein family HMM PF00058; match to protein family HMM TIGR02276.
  
  
 0.573
MCA1906
Identified by similarity to SP:Q51658; match to protein family HMM PF03150.
  
  
 0.506
MCA2402
CBS domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF04982.
       0.492
MCA2403
Putative membrane-bound lytic murein transglycosylase; Identified by similarity to SP:P23931; match to protein family HMM PF01464; match to protein family HMM PF01476.
       0.492
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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