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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA2408Conserved hypothetical protein; Identified by similarity to GP:4100188. (160 aa)    
Predicted Functional Partners:
MCA2409
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.906
MCA2410
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.846
MCA2411
Putative thiamine biosynthesis lipoprotein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
 
     0.814
MCA2414
Glycosyl transferase, group 1 family domain protein; Identified by match to protein family HMM PF00534.
  
    0.655
MCA2412
Glutamine amidotransferase, class II; Identified by match to protein family HMM PF00310.
       0.654
MCA2413
Hypothetical protein; Identified by Glimmer2; putative.
       0.654
MCA2407
Conserved hypothetical protein; Identified by similarity to OMNI:NTL03PA00380; match to protein family HMM PF04241.
       0.540
MCA2406
Hypothetical protein; Identified by Glimmer2; putative.
       0.444
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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