Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MCA2506 | MCA2507 | Identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738. | Identified by similarity to SP:P73925; match to protein family HMM PF01152. | 0.576 |
MCA2506 | MCA2508 | Identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738. | Putative oxygenase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | 0.666 |
MCA2507 | MCA2506 | Identified by similarity to SP:P73925; match to protein family HMM PF01152. | Identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738. | 0.576 |
MCA2507 | MCA2508 | Identified by similarity to SP:P73925; match to protein family HMM PF01152. | Putative oxygenase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | 0.928 |
MCA2508 | MCA2506 | Putative oxygenase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | Identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738. | 0.666 |
MCA2508 | MCA2507 | Putative oxygenase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | Identified by similarity to SP:P73925; match to protein family HMM PF01152. | 0.928 |