Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MCA2564 | MCA2565 | Putative prenyltransferase, UbiA family; Identified by match to protein family HMM PF01040; Belongs to the UbiA prenyltransferase family. | Hypothetical protein; Identified by Glimmer2; putative. | 0.910 |
MCA2564 | MCA2566 | Putative prenyltransferase, UbiA family; Identified by match to protein family HMM PF01040; Belongs to the UbiA prenyltransferase family. | Putative oxidoreductase, FAD-binding; Identified by similarity to GP:7649572; match to protein family HMM PF01565. | 0.865 |
MCA2564 | MCA2567 | Putative prenyltransferase, UbiA family; Identified by match to protein family HMM PF01040; Belongs to the UbiA prenyltransferase family. | Oxidoreductase, short-chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106. | 0.866 |
MCA2565 | MCA2564 | Hypothetical protein; Identified by Glimmer2; putative. | Putative prenyltransferase, UbiA family; Identified by match to protein family HMM PF01040; Belongs to the UbiA prenyltransferase family. | 0.910 |
MCA2565 | MCA2566 | Hypothetical protein; Identified by Glimmer2; putative. | Putative oxidoreductase, FAD-binding; Identified by similarity to GP:7649572; match to protein family HMM PF01565. | 0.947 |
MCA2565 | MCA2567 | Hypothetical protein; Identified by Glimmer2; putative. | Oxidoreductase, short-chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106. | 0.951 |
MCA2566 | MCA2564 | Putative oxidoreductase, FAD-binding; Identified by similarity to GP:7649572; match to protein family HMM PF01565. | Putative prenyltransferase, UbiA family; Identified by match to protein family HMM PF01040; Belongs to the UbiA prenyltransferase family. | 0.865 |
MCA2566 | MCA2565 | Putative oxidoreductase, FAD-binding; Identified by similarity to GP:7649572; match to protein family HMM PF01565. | Hypothetical protein; Identified by Glimmer2; putative. | 0.947 |
MCA2566 | MCA2567 | Putative oxidoreductase, FAD-binding; Identified by similarity to GP:7649572; match to protein family HMM PF01565. | Oxidoreductase, short-chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106. | 0.948 |
MCA2567 | MCA2564 | Oxidoreductase, short-chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106. | Putative prenyltransferase, UbiA family; Identified by match to protein family HMM PF01040; Belongs to the UbiA prenyltransferase family. | 0.866 |
MCA2567 | MCA2565 | Oxidoreductase, short-chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106. | Hypothetical protein; Identified by Glimmer2; putative. | 0.951 |
MCA2567 | MCA2566 | Oxidoreductase, short-chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106. | Putative oxidoreductase, FAD-binding; Identified by similarity to GP:7649572; match to protein family HMM PF01565. | 0.948 |