STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA2571Radical SAM domain protein; Identified by similarity to GP:17130075; match to protein family HMM PF04055. (365 aa)    
Predicted Functional Partners:
polI
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
    0.826
MCA2572
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01MT00637; match to protein family HMM PF01986.
       0.773
MCA2569
Hypothetical protein; Identified by Glimmer2; putative.
       0.623
MCA2570
Conserved hypothetical protein; Identified by similarity to OMNI:NTL02ML5433.
       0.623
MCA1701
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.583
MCA2112
Conserved hypothetical protein; Identified by similarity to GP:4378852.
  
     0.552
MCA2574
Conserved hypothetical protein; Identified by similarity to GP:12698380.
       0.512
MCA0491
Conserved hypothetical protein; Identified by similarity to GP:4378852.
  
     0.489
MCA2575
Conserved domain protein.
       0.417
MCA0608
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SS02055.
  
     0.413
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.