MCA2578 protein (Methylococcus capsulatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MCA2578

Molybdenum ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (261 aa)

Predicted Functional Partners:

MCA2579

0.998

modB

0.975

MCA2580

0.973

cysT

0.965

cysW

0.960

cysN

0.928

MCA2836

0.920

modC

0.904

MCA0589

0.839

modA-1

0.817

Your Current Organism:

Methylococcus capsulatus

NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MCA0589	MCA2578	MCA0589	MCA2578	Putative nitrate transporter; Identified by similarity to SP:P38043.	Molybdenum ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.839
MCA0589	cysN	MCA0589	MCA2628	Putative nitrate transporter; Identified by similarity to SP:P38043.	Putative nodQ bifunctional enzyme; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.	0.577
MCA0589	modC	MCA0589	MCA1380	Putative nitrate transporter; Identified by similarity to SP:P38043.	Molybdenum ABC transporter, ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family.	0.623
MCA2578	MCA0589	MCA2578	MCA0589	Molybdenum ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Putative nitrate transporter; Identified by similarity to SP:P38043.	0.839
MCA2578	MCA2579	MCA2578	MCA2579	Molybdenum ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Molybdenum ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	0.998
MCA2578	MCA2580	MCA2578	MCA2580	Molybdenum ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Molybdenum ABC transporter, periplasmic molybdenum-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01256.	0.973
MCA2578	MCA2836	MCA2578	MCA2836	Molybdenum ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Putative molybdenum ABC transporter, ATP-binding protein; Identified by similarity to SP:P09833; match to protein family HMM PF00005; match to protein family HMM TIGR00638.	0.920
MCA2578	cysN	MCA2578	MCA2628	Molybdenum ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Putative nodQ bifunctional enzyme; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.	0.928
MCA2578	cysT	MCA2578	MCA1183	Molybdenum ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Sulfate ABC transporter, permease protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	0.965
MCA2578	cysW	MCA2578	MCA1182	Molybdenum ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Sulfate ABC transporter, permease protein; Identified by similarity to SP:P16702; match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02140.	0.960
MCA2578	modA-1	MCA2578	MCA1377	Molybdenum ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Molybdenum ABC transporter, periplasmic molybdate-binding protein; Identified by similarity to SP:P37734; match to protein family HMM PF01547; match to protein family HMM TIGR01256.	0.817
MCA2578	modB	MCA2578	MCA1379	Molybdenum ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Molybdenum ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	0.975
MCA2578	modC	MCA2578	MCA1380	Molybdenum ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Molybdenum ABC transporter, ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family.	0.904
MCA2579	MCA2578	MCA2579	MCA2578	Molybdenum ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	Molybdenum ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.998
MCA2579	MCA2580	MCA2579	MCA2580	Molybdenum ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	Molybdenum ABC transporter, periplasmic molybdenum-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01256.	0.995
MCA2579	MCA2836	MCA2579	MCA2836	Molybdenum ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	Putative molybdenum ABC transporter, ATP-binding protein; Identified by similarity to SP:P09833; match to protein family HMM PF00005; match to protein family HMM TIGR00638.	0.952
MCA2579	modA-1	MCA2579	MCA1377	Molybdenum ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	Molybdenum ABC transporter, periplasmic molybdate-binding protein; Identified by similarity to SP:P37734; match to protein family HMM PF01547; match to protein family HMM TIGR01256.	0.944
MCA2579	modB	MCA2579	MCA1379	Molybdenum ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	Molybdenum ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	0.914
MCA2579	modC	MCA2579	MCA1380	Molybdenum ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	Molybdenum ABC transporter, ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family.	0.991
MCA2580	MCA2578	MCA2580	MCA2578	Molybdenum ABC transporter, periplasmic molybdenum-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01256.	Molybdenum ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.973

page 1 of 4

Server load: low (30%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About