Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MCA2590Putative cytochrome c peroxidase family protein. (773 aa)    
Predicted Functional Partners:
mopE
Surface-associated protein precursor; Identified by similarity to GP:13506915.
     
 0.877
MCA0338
Cytochrome c5530 family protein; Identified by similarity to GP:4325062.
  
   
 0.775
MCA2974
PKD domain protein.
  
   
 0.723
MCA1132
Conserved hypothetical protein; Identified by similarity to GP:17131502.
  
     0.712
MCA0524
Cytochrome P460; Identified by similarity to GP:3659895.
  
  
 0.680
MCA2181
Identified by match to protein family HMM PF00034.
  
   
 0.668
MCA2792
Conserved hypothetical protein; Identified by similarity to OMNI:CC3693; match to protein family HMM PF05494.
  
   
 0.663
MCA2224
PKD domain protein; Identified by match to protein family HMM PF00801.
  
   
 0.643
MCA2410
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.638
MCA2405
Cytochrome c family protein; Identified by similarity to SP:P95339; match to protein family HMM PF00034.
   
  
 0.629
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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