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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA2590Putative cytochrome c peroxidase family protein. (773 aa)    
Predicted Functional Partners:
mopE
Surface-associated protein precursor; Identified by similarity to GP:13506915.
     
 0.763
MCA1132
Conserved hypothetical protein; Identified by similarity to GP:17131502.
  
     0.712
MCA2410
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.638
MCA0317
Selenium-binding family protein; Identified by similarity to SP:Q63836.
 
   0.606
MCA2224
PKD domain protein; Identified by match to protein family HMM PF00801.
  
   
 0.577
MCA2326
Conserved domain protein.
  
     0.551
MCA1768
Putative outer membrane heavy metal efflux protein; Identified by similarity to OMNI:CC2721; match to protein family HMM PF02321.
  
     0.545
MCA1289
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.543
MCA2401
Conserved domain protein; Identified by similarity to OMNI:NTL01ATA0505.
  
    0.540
MCA2129
Identified by similarity to GP:4580028; match to protein family HMM PF07731; match to protein family HMM PF07732.
  
     0.539
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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