Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MCA2601Identified by similarity to GP:4008541; match to protein family HMM PF03372. (282 aa)    
Predicted Functional Partners:
dsbA
Thiol:disulfide interchange protein DsbA; Identified by similarity to SP:P32557; match to protein family HMM PF01323.
  
  
 0.824
csdB
Selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
   0.752
MCA1503
Putative membrane protein; Identified by similarity to OMNI:NTL03PA04934.
  
     0.610
MCA0323
Conserved domain protein; Identified by similarity to GP:17429805.
  
     0.587
MCA2603
Cytochrome c family protein; Identified by similarity to SP:P43302; match to protein family HMM PF00034.
       0.547
MCA2036
Putative membrane protein; Identified by similarity to OMNI:NTL03PA04934.
  
     0.506
engB
GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
       0.488
MCA3053
Conserved hypothetical protein; Identified by similarity to OMNI:NTL03PA04524; match to protein family HMM PF07793.
  
     0.475
MCA1184
Conserved hypothetical protein; Identified by similarity to GP:9478255.
  
    0.457
MCA0665
Putative glycine cleavage system transcriptional repressor; Identified by similarity to SP:P23483.
  
     0.448
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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