Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| MCA0338 | MCA2612 | MCA0338 | MCA2612 | Cytochrome c5530 family protein; Identified by similarity to GP:4325062. | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | 0.547 |
| MCA1800 | MCA2612 | MCA1800 | MCA2612 | Putative oxidoreductase; Identified by similarity to GP:19879585; match to protein family HMM PF07992. | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | 0.469 |
| MCA1800 | soxY | MCA1800 | MCA1987 | Putative oxidoreductase; Identified by similarity to GP:19879585; match to protein family HMM PF07992. | Sulfur compound-chelating protein SoxY; Identified by similarity to GP:19879576. | 0.823 |
| MCA2133 | MCA2612 | MCA2133 | MCA2612 | Glutaredoxin family protein; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins. | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | 0.412 |
| MCA2612 | MCA0338 | MCA2612 | MCA0338 | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | Cytochrome c5530 family protein; Identified by similarity to GP:4325062. | 0.547 |
| MCA2612 | MCA1800 | MCA2612 | MCA1800 | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | Putative oxidoreductase; Identified by similarity to GP:19879585; match to protein family HMM PF07992. | 0.469 |
| MCA2612 | MCA2133 | MCA2612 | MCA2133 | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | Glutaredoxin family protein; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins. | 0.412 |
| MCA2612 | rplM | MCA2612 | MCA0904 | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.403 |
| MCA2612 | rpsQ | MCA2612 | MCA2363 | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.437 |
| MCA2612 | soxY | MCA2612 | MCA1987 | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | Sulfur compound-chelating protein SoxY; Identified by similarity to GP:19879576. | 0.444 |
| MCA2612 | ybeY | MCA2612 | MCA1457 | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | Conserved hypothetical protein TIGR00043; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.465 |
| rplM | MCA2612 | MCA0904 | MCA2612 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | 0.403 |
| rplM | rpsQ | MCA0904 | MCA2363 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.980 |
| rplM | ybeY | MCA0904 | MCA1457 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Conserved hypothetical protein TIGR00043; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.766 |
| rpsQ | MCA2612 | MCA2363 | MCA2612 | Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | 0.437 |
| rpsQ | rplM | MCA2363 | MCA0904 | Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.980 |
| rpsQ | ybeY | MCA2363 | MCA1457 | Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | Conserved hypothetical protein TIGR00043; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.800 |
| soxY | MCA1800 | MCA1987 | MCA1800 | Sulfur compound-chelating protein SoxY; Identified by similarity to GP:19879576. | Putative oxidoreductase; Identified by similarity to GP:19879585; match to protein family HMM PF07992. | 0.823 |
| soxY | MCA2612 | MCA1987 | MCA2612 | Sulfur compound-chelating protein SoxY; Identified by similarity to GP:19879576. | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | 0.444 |
| ybeY | MCA2612 | MCA1457 | MCA2612 | Conserved hypothetical protein TIGR00043; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | 0.465 |
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