Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MCA2634Prophage LambdaMc01, site-specific recombinase, resolvase family; Identified by similarity to GP:17430196; match to protein family HMM PF00239; match to protein family HMM PF07508. (459 aa)    
Predicted Functional Partners:
MCA2635
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS3170.
 
     0.950
MCA2632
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS3173.
 
     0.947
MCA2633
Prophage LambdaMc01, site-specific recombinase, resolvase family, truncation.
 
     0.947
MCA2641
Conserved hypothetical protein; Identified by similarity to GP:17430262.
 
     0.855
MCA2643
Conserved hypothetical protein; Identified by similarity to GP:17427847.
 
     0.855
MCA2644
Conserved hypothetical protein; Identified by similarity to GP:17430259.
 
     0.854
MCA2646
Conserved hypothetical protein; Identified by similarity to GP:17430256.
 
     0.835
MCA2651
Conserved hypothetical protein; Identified by similarity to GP:17430251.
 
     0.777
MCA2636
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
MCA2654
Prophage LambdaMc01, DNA methyltransferase; Identified by match to protein family HMM PF01555; Belongs to the N(4)/N(6)-methyltransferase family.
 
   
 0.768
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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