STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA2642Conserved domain protein; Identified by similarity to OMNI:NTL01XF01664; match to protein family HMM PF02498. (252 aa)    
Predicted Functional Partners:
MCA2641
Conserved hypothetical protein; Identified by similarity to GP:17430262.
 
     0.901
MCA2644
Conserved hypothetical protein; Identified by similarity to GP:17430259.
 
     0.859
MCA2648
Prophage LambdaMc01, DNA primase, P4 family; Identified by match to protein family HMM PF03288; match to protein family HMM TIGR01613.
 
     0.849
MCA2643
Conserved hypothetical protein; Identified by similarity to GP:17427847.
 
     0.833
MCA2640
Conserved hypothetical protein; Identified by similarity to GP:17430263.
  
    0.785
MCA2646
Conserved hypothetical protein; Identified by similarity to GP:17430256.
 
     0.728
MCA2651
Conserved hypothetical protein; Identified by similarity to GP:17430251.
 
     0.675
MCA2645
Conserved hypothetical protein; Identified by similarity to GP:17430258.
       0.636
MCA2647
Conserved hypothetical protein; Identified by similarity to GP:17430255.
       0.636
MCA2632
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS3173.
 
     0.554
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.