STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA2649Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS3228. (158 aa)    
Predicted Functional Partners:
MCA2651
Conserved hypothetical protein; Identified by similarity to GP:17430251.
 
     0.952
MCA2655
Prophage LambdaMc01, DNA methyltransferase; Identified by similarity to GP:17427857; match to protein family HMM PF01555; match to protein family HMM PF02195; Belongs to the N(4)/N(6)-methyltransferase family.
     0.922
MCA2646
Conserved hypothetical protein; Identified by similarity to GP:17430256.
 
     0.893
MCA2648
Prophage LambdaMc01, DNA primase, P4 family; Identified by match to protein family HMM PF03288; match to protein family HMM TIGR01613.
 
     0.888
MCA2644
Conserved hypothetical protein; Identified by similarity to GP:17430259.
 
     0.866
MCA2643
Conserved hypothetical protein; Identified by similarity to GP:17427847.
 
     0.865
MCA2641
Conserved hypothetical protein; Identified by similarity to GP:17430262.
 
     0.864
ruvA
Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.
  
 
 0.840
MCA2635
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS3170.
 
   
 0.814
MCA2632
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS3173.
 
     0.809
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.