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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA2674Conserved domain protein; Identified by similarity to GP:17427889. (361 aa)    
Predicted Functional Partners:
MCA2673
Conserved hypothetical protein; Identified by similarity to GP:17427888.
       0.799
MCA2675
Conserved hypothetical protein; Identified by similarity to GP:17427890.
       0.799
MCA2676
Conserved hypothetical protein.
       0.799
MCA2677
Conserved hypothetical protein; Identified by similarity to GP:17427892.
       0.794
MCA2671
Conserved hypothetical protein; Identified by similarity to OMNI:NT01MC3182.
       0.732
MCA2672
Conserved hypothetical protein; Identified by similarity to GP:17427887.
       0.732
MCA2670
Putative prophage LambdaMc01, tail tape measure protein; Identified by similarity to GP:6901589.
       0.622
MCA2680
Prophage LambdaMc01, lysozyme; Identified by similarity to SP:P10439; match to protein family HMM PF00959.
       0.562
MCA2678
Conserved hypothetical protein; Identified by similarity to GP:17427893.
       0.550
MCA2679
Conserved hypothetical protein; Identified by similarity to GP:17430219.
       0.543
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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