close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA2678Conserved hypothetical protein; Identified by similarity to GP:17427893. (100 aa)    
Predicted Functional Partners:
MCA2680
Prophage LambdaMc01, lysozyme; Identified by similarity to SP:P10439; match to protein family HMM PF00959.
 
     0.894
MCA2657
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RSA0579.
 
     0.838
MCA2662
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS0859.
 
     0.831
MCA2658
Prophage LambdaMc01, terminase, large subunit; Identified by match to protein family HMM PF05876.
 
     0.829
MCA2660
Prophage LambdaMc01, portal protein, lambda family; Identified by match to protein family HMM PF05136; match to protein family HMM TIGR01539.
 
     0.828
MCA2656
Conserved hypothetical protein; Identified by similarity to GP:17430238.
 
     0.819
MCA2663
Conserved hypothetical protein; Identified by similarity to GP:6723249.
 
     0.817
MCA2679
Conserved hypothetical protein; Identified by similarity to GP:17430219.
       0.783
MCA2651
Conserved hypothetical protein; Identified by similarity to GP:17430251.
  
     0.774
MCA2641
Conserved hypothetical protein; Identified by similarity to GP:17430262.
  
     0.772
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.