Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MCA2733HAD-superfamily hydrolase, subfamily IA, variant 3 family protein; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509. (237 aa)    
Predicted Functional Partners:
MCA2732
Conserved hypothetical protein; Identified by similarity to GP:19915032.
       0.799
MCA2731
Flavin reductase-like domain protein; Identified by match to protein family HMM PF01613.
       0.773
MCA2734
Hypothetical protein; Identified by Glimmer2; putative.
       0.631
MCA2379
Conserved hypothetical protein; Identified by similarity to GP:9950959.
  
    0.592
MCA2048
Oxidoreductase, Gfo/Idh/MocA family; Identified by similarity to OMNI:CC1574; match to protein family HMM PF03446; match to protein family HMM PF07676.
      0.588
moaC
Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
       0.556
MCA0041
Oxidoreductase, Gfo/Idh/MocA family; Identified by similarity to OMNI:NTL01BH3849; match to protein family HMM PF01408; match to protein family HMM PF02894.
  
     0.459
MCA0942
Putative oligo-1,6-glucosidase; Identified by similarity to PIR:JE0181; match to protein family HMM PF00128.
 
  
 0.415
MCA2735
Putative transporter.
       0.410
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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