STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA2777Conserved hypothetical protein; Identified by similarity to GP:17427348. (168 aa)    
Predicted Functional Partners:
MCA2778
Formaldehyde-activating enzyme domain protein; Identified by similarity to GP:11193064.
       0.741
MCA0171
Putative lipoprotein; Identified by similarity to GP:17427325.
  
     0.543
MCA0956
Hydroxylamine oxydoreductase; Identified by similarity to SP:Q50925.
  
     0.486
MCA0132
Conserved hypothetical protein; Identified by similarity to OMNI:NTL03PA00112.
  
     0.482
MCA2779
Multidrug resistance protein; Identified by similarity to GP:12024949; match to protein family HMM PF00893.
       0.454
MCA2510
Putative lipoprotein.
  
     0.444
hpnR
Radical SAM domain/B12 binding domain protein; Required for methylation of hopanoids at the C-3 position.
  
  
 0.437
MCA2181
Identified by match to protein family HMM PF00034.
  
     0.431
MCA0197
Conserved hypothetical protein; Identified by similarity to OMNI:NTL02SS0707; match to protein family HMM PF01864.
  
     0.410
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.