STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA2807Putative methyltransferase. (267 aa)    
Predicted Functional Partners:
MCA2808
Conserved hypothetical protein; Identified by similarity to GP:17427115; match to protein family HMM PF00903.
 
     0.604
MCA1559
Conserved hypothetical protein; Identified by similarity to GP:4731342.
  
     0.578
MCA2806
Pyridoxal-dependent decarboxylase domain protein; Identified by similarity to OMNI:NTL01BH0567; match to protein family HMM PF00282.
       0.538
MCA3003
Methyltransferase, UbiE/COQ5 family; Identified by match to protein family HMM PF01209.
  
     0.401
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.