Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MCA2864Putative ribosomal protein S6 modification protein; Identified by similarity to SP:P17116; match to protein family HMM TIGR00768. (308 aa)    
Predicted Functional Partners:
MCA2865
ATP:dephospho-CoA triphosphoribosyl transferase; Identified by similarity to GP:11193063; match to protein family HMM PF01874.
     0.974
mch
Putative n5,n10-methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl- H(4)MPT; Belongs to the MCH family.
 
     0.951
MCA2862
Conserved hypothetical protein; Identified by similarity to GP:3237331.
 
     0.927
MCA2861
Putative kinase, GHMP family; Identified by match to protein family HMM PF00288; match to protein family HMM TIGR00144.
 
     0.925
MCA2866
Formaldehyde-activating enzyme; Identified by similarity to GP:11193064.
 
     0.882
MCA2860
Formylmethanofuran dehydrogenase; Identified by similarity to GP:1881465.
 
     0.872
ffsA
Formylmethanofurane tetrahydromethanopterin formyltransferase; Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT); Belongs to the FTR family.
 
     0.861
MCA2859
Putative formylmethanofurane dehydrogenase, A subunit; Identified by similarity to GP:1890210; match to protein family HMM PF07969.
 
     0.856
MCA2857
Putative formylmethanofurane dehydrogenase subunit; Identified by similarity to SP:Q59579; match to protein family HMM PF01493.
 
     0.851
MCA3018
Putative methylene tetrahydromethanopterin dehydrogenase/methylenetetrahydrofolate dehydrogenase; Identified by similarity to SP:P55818.
 
     0.785
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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