STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA2920Conserved hypothetical protein; Identified by similarity to GP:16502713. (65 aa)    
Predicted Functional Partners:
MCA2919
Putative prophage MuMc02, tail sheath protein; Identified by match to protein family HMM PF04984.
       0.773
MCA2921
Conserved hypothetical protein; Identified by similarity to GP:16502712.
       0.773
MCA2922
Conserved hypothetical protein; Identified by similarity to GP:16502711.
       0.773
MCA2923
Conserved hypothetical protein; Identified by similarity to GP:6723249.
       0.773
MCA2924
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS0859.
       0.773
MCA2925
Conserved hypothetical protein; Identified by similarity to GP:16502708.
       0.757
MCA2917
Conserved hypothetical protein; Identified by similarity to SP:P44181.
       0.408
MCA2918
Prophage MuMc02, major tail tube protein; Identified by match to protein family HMM PF04985; match to protein family HMM TIGR01611.
       0.408
MCA2926
Prophage MuMc02, virion morphogenesis protein; Identified by match to protein family HMM PF05069; match to protein family HMM TIGR01635.
       0.400
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.