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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA2937Hypothetical protein; Identified by Glimmer2; putative. (91 aa)    
Predicted Functional Partners:
MCA2932
Conserved hypothetical protein; Identified by similarity to GP:16502705; match to protein family HMM PF06074.
  
    0.784
MCA2933
Putative prophage MuMc02, terminase, ATPase subunit; Identified by similarity to OMNI:DRA0094.
       0.783
MCA2934
Conserved hypothetical protein; Identified by similarity to GP:16502703.
       0.783
MCA2935
Conserved hypothetical protein; Identified by similarity to SP:Q9T1W8.
       0.783
MCA2936
Hypothetical protein; Identified by Glimmer2; putative.
       0.781
MCA2931
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
MCA2938
Conserved domain protein.
       0.773
MCA2939
Putative prophage MuMc02, lipoprotein; Identified by similarity to GP:2315457.
       0.773
MCA2940
Prophage MuMc02, structural protein P5; Identified by similarity to GP:5453372.
       0.773
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.760
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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