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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gamProphage MuMc02, host-nuclease inhibitor protein; Identified by similarity to SP:P06023; match to protein family HMM PF07352. (165 aa)    
Predicted Functional Partners:
MCA2949
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
MCA2950
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
MCA2951
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
MCA2946
Conserved hypothetical protein; Identified by similarity to OMNI:NMB0985.
  
    0.708
MCA2927
Prophage MuMc02, F protein precursor; Includes an intein; identified by match to protein family HMM PF04233; match to protein family HMM TIGR01443; match to protein family HMM TIGR01641.
 
     0.705
MCA2935
Conserved hypothetical protein; Identified by similarity to SP:Q9T1W8.
 
     0.703
MCA2932
Conserved hypothetical protein; Identified by similarity to GP:16502705; match to protein family HMM PF06074.
 
     0.677
MCA2954
Prophage MuMc02, transposition protein B; Identified by similarity to GP:974770.
 
   
 0.672
hup
Prophage MuMc02, DNA-binding protein HU; Identified by similarity to SP:P02346; match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family.
       0.668
MCA0623
Conserved domain protein; Identified by similarity to GP:11641086.
  
     0.635
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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