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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA2959Prophage MuMc02, peptidase, family S24; Identified by match to protein family HMM PF00717; Belongs to the peptidase S24 family. (193 aa)    
Predicted Functional Partners:
MCA2926
Prophage MuMc02, virion morphogenesis protein; Identified by match to protein family HMM PF05069; match to protein family HMM TIGR01635.
  
    0.588
MCA2932
Conserved hypothetical protein; Identified by similarity to GP:16502705; match to protein family HMM PF06074.
 
     0.500
MCA2954
Prophage MuMc02, transposition protein B; Identified by similarity to GP:974770.
 
     0.476
MCA2911
Putative prophage MuMc02, late control gene D protein; Identified by similarity to OMNI:NTL01ST4206.
  
  
 0.469
MCA2927
Prophage MuMc02, F protein precursor; Includes an intein; identified by match to protein family HMM PF04233; match to protein family HMM TIGR01443; match to protein family HMM TIGR01641.
 
     0.465
MCA2910
Prophage MuMc02, baseplate assembly protein V; Identified by match to protein family HMM PF04717; match to protein family HMM TIGR01644.
  
     0.463
MCA2907
Putative prophage MuMc02, bacteriocin protein; Identified by similarity to GP:4586892; match to protein family HMM PF04865.
  
    0.427
MCA2919
Putative prophage MuMc02, tail sheath protein; Identified by match to protein family HMM PF04984.
  
    0.410
MCA2914
Prophage MuMc02, tail tape measure protein, TP901 family; Identified by match to protein family HMM TIGR01760.
  
    0.402
MCA2925
Conserved hypothetical protein; Identified by similarity to GP:16502708.
  
   
 0.401
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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