Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MCA2963Conserved domain protein; Identified by similarity to SP:P48837. (230 aa)    
Predicted Functional Partners:
MCA0781
Cytochrome c family protein; Identified by similarity to SP:P14774; match to protein family HMM PF00034.
  
     0.730
MCA0785
MxaA protein; Identified by similarity to GP:773180.
  
     0.722
MCA1530
Putative MxaL protein; Identified by similarity to GP:773183.
  
     0.710
MCA1528
Putative MxaC protein; Identified by similarity to GP:1164996.
  
     0.708
MCA0780
MxaJ protein; Identified by similarity to GP:7258335.
  
     0.707
MCA0786
MxaC protein; Identified by similarity to GP:1164996.
  
     0.699
MCA0787
MxaK protein; Identified by similarity to GP:2828246.
  
     0.693
MCA0784
Conserved hypothetical protein; Identified by similarity to GP:19917169.
  
     0.680
MCA0788
MxaL protein; Identified by similarity to GP:773183.
  
     0.679
mxaI
Methanol dehydrogenase, small subunit; Catalyzes the oxidation of primary alcohols including methanol.
  
     0.678
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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