MCA3005 protein (Methylococcus capsulatus) - STRING interaction network

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MCA3005

ATP-dependent RNA helicase, DEAD/DEAH box family; Identified by similarity to OMNI:NTL01SM00503; match to protein family HMM PF00176; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851. (1212 aa)

Predicted Functional Partners:

MCA3011

0.919

MCA3008

0.918

MCA2684

0.741

MCA1991

0.720

rpoA

0.681

rpoB

0.650

MCA3006

0.634

MCA3007

0.634

MCA3009

0.632

MCA3010

0.626

Your Current Organism:

Methylococcus capsulatus

NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MCA1991	MCA3005	MCA1991	MCA3005	Putative ATP-dependent helicase; Identified by similarity to SP:P54394.	ATP-dependent RNA helicase, DEAD/DEAH box family; Identified by similarity to OMNI:NTL01SM00503; match to protein family HMM PF00176; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851.	0.720
MCA1991	rpoA	MCA1991	MCA2347	Putative ATP-dependent helicase; Identified by similarity to SP:P54394.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.854
MCA1991	rpoB	MCA1991	MCA1066	Putative ATP-dependent helicase; Identified by similarity to SP:P54394.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.809
MCA2684	MCA3005	MCA2684	MCA3005	Conserved domain protein; Identified by similarity to GP:19887865.	ATP-dependent RNA helicase, DEAD/DEAH box family; Identified by similarity to OMNI:NTL01SM00503; match to protein family HMM PF00176; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851.	0.741
MCA2684	MCA3011	MCA2684	MCA3011	Conserved domain protein; Identified by similarity to GP:19887865.	Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SM00499.	0.752
MCA3005	MCA1991	MCA3005	MCA1991	ATP-dependent RNA helicase, DEAD/DEAH box family; Identified by similarity to OMNI:NTL01SM00503; match to protein family HMM PF00176; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851.	Putative ATP-dependent helicase; Identified by similarity to SP:P54394.	0.720
MCA3005	MCA2684	MCA3005	MCA2684	ATP-dependent RNA helicase, DEAD/DEAH box family; Identified by similarity to OMNI:NTL01SM00503; match to protein family HMM PF00176; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851.	Conserved domain protein; Identified by similarity to GP:19887865.	0.741
MCA3005	MCA3006	MCA3005	MCA3006	ATP-dependent RNA helicase, DEAD/DEAH box family; Identified by similarity to OMNI:NTL01SM00503; match to protein family HMM PF00176; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851.	Transcriptional regulator, AbrB family; Identified by match to protein family HMM TIGR01439.	0.634
MCA3005	MCA3007	MCA3005	MCA3007	ATP-dependent RNA helicase, DEAD/DEAH box family; Identified by similarity to OMNI:NTL01SM00503; match to protein family HMM PF00176; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851.	Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SS00950.	0.634
MCA3005	MCA3008	MCA3005	MCA3008	ATP-dependent RNA helicase, DEAD/DEAH box family; Identified by similarity to OMNI:NTL01SM00503; match to protein family HMM PF00176; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851.	Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SM00500; match to protein family HMM PF06634.	0.918
MCA3005	MCA3009	MCA3005	MCA3009	ATP-dependent RNA helicase, DEAD/DEAH box family; Identified by similarity to OMNI:NTL01SM00503; match to protein family HMM PF00176; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851.	PHP N-terminal domain protein; Identified by match to protein family HMM PF02231.	0.632
MCA3005	MCA3010	MCA3005	MCA3010	ATP-dependent RNA helicase, DEAD/DEAH box family; Identified by similarity to OMNI:NTL01SM00503; match to protein family HMM PF00176; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851.	Conserved hypothetical protein; Identified by similarity to GP:19916313; match to protein family HMM PF04326.	0.626
MCA3005	MCA3011	MCA3005	MCA3011	ATP-dependent RNA helicase, DEAD/DEAH box family; Identified by similarity to OMNI:NTL01SM00503; match to protein family HMM PF00176; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851.	Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SM00499.	0.919
MCA3005	rpoA	MCA3005	MCA2347	ATP-dependent RNA helicase, DEAD/DEAH box family; Identified by similarity to OMNI:NTL01SM00503; match to protein family HMM PF00176; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.681
MCA3005	rpoB	MCA3005	MCA1066	ATP-dependent RNA helicase, DEAD/DEAH box family; Identified by similarity to OMNI:NTL01SM00503; match to protein family HMM PF00176; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.650
MCA3006	MCA3005	MCA3006	MCA3005	Transcriptional regulator, AbrB family; Identified by match to protein family HMM TIGR01439.	ATP-dependent RNA helicase, DEAD/DEAH box family; Identified by similarity to OMNI:NTL01SM00503; match to protein family HMM PF00176; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851.	0.634
MCA3006	MCA3007	MCA3006	MCA3007	Transcriptional regulator, AbrB family; Identified by match to protein family HMM TIGR01439.	Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SS00950.	0.814
MCA3006	MCA3008	MCA3006	MCA3008	Transcriptional regulator, AbrB family; Identified by match to protein family HMM TIGR01439.	Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SM00500; match to protein family HMM PF06634.	0.773
MCA3006	MCA3009	MCA3006	MCA3009	Transcriptional regulator, AbrB family; Identified by match to protein family HMM TIGR01439.	PHP N-terminal domain protein; Identified by match to protein family HMM PF02231.	0.757
MCA3006	MCA3010	MCA3006	MCA3010	Transcriptional regulator, AbrB family; Identified by match to protein family HMM TIGR01439.	Conserved hypothetical protein; Identified by similarity to GP:19916313; match to protein family HMM PF04326.	0.757

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