STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA3049Hexulose-6-phosphate synthase; Identified by similarity to GP:6899861; match to protein family HMM PF00215. (215 aa)    
Predicted Functional Partners:
MCA3050
SIS domain protein; Identified by match to protein family HMM PF01380.
  
 0.995
MCA3044
SIS domain protein; Identified by match to protein family HMM PF01380.
  
 0.984
MCA2866
Formaldehyde-activating enzyme; Identified by similarity to GP:11193064.
 
      0.683
MCA3048
Hypothetical protein; Identified by Glimmer2; putative.
       0.479
tkt-2
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
     
 0.450
MCA2738
Putative hexulose-6-phosphate synthase/SIS domain protein; Identified by similarity to GP:6899861; match to protein family HMM PF00215; match to protein family HMM PF01380.
 
  
0.445
MCA0746
Sugar isomerase, KpsF/GutQ; Identified by similarity to SP:P45395; match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393.
  
  
 0.443
cbbP
Phosphoribulokinase; Identified by similarity to SP:P23015; match to protein family HMM PF00485.
       0.422
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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