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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA3075Hypothetical protein; Identified by Glimmer2; putative. (309 aa)    
Predicted Functional Partners:
MCA3076
Conserved hypothetical protein; Identified by similarity to GP:17135441.
 
     0.905
MCA3077
Conserved hypothetical integral membrane protein; Identified by similarity to GP:17135440; similarity to OMNI:NT01MC2877.
 
     0.866
MCA3078
ABC transporter, ATP-binding family protein; Identified by similarity to OMNI:NTL01SS02600; match to protein family HMM PF00005.
 
     0.812
MCA2712
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SMB00554.
  
     0.601
mutM
formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.
       0.601
MCA0878
Conserved hypothetical protein; Identified by similarity to OMNI:NTL02ML2446.
  
     0.600
MCA2799
Conserved hypothetical protein; Identified by similarity to OMNI:NTL03PA04369; match to protein family HMM PF00036.
  
     0.587
MCA2118
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SS00882; match to protein family HMM PF03065.
  
     0.539
MCA3073
Hypothetical protein; Identified by Glimmer2; putative.
       0.539
MCA3074
Putative alginate O-acetyltransferase; Identified by similarity to GP:1245347; match to protein family HMM PF03062; Belongs to the membrane-bound acyltransferase family.
       0.539
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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