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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ogrKOgr protein. (73 aa)    
Predicted Functional Partners:
plu0010
Unnamed protein product; Similar to protein U (gpU) of Enterobacteria phage P2.
  
    0.852
plu0009
Unnamed protein product; Similar to protein D (gpD) of Enterobacteria phage P2.
  
    0.671
plu0013
Unnamed protein product; Similar to protein E (gpE) of Enterobacteria phage P2.
  
    0.665
plu4059
Unnamed protein product; Hypothetical protein.
   
    0.644
plu0024
GPW_gp25 domain-containing protein; Unnamed protein product; Similar to protein W (gpW) of Enterobacteria phage P2.
   
    0.643
plu0011
PhageMin_Tail domain-containing protein; Unnamed protein product; Similar to protein T (gpT) of Enterobacteria phage P2.
  
    0.638
plu0026
Unnamed protein product; Highly similar to tail protein.
   
    0.596
plu2936
YqaJ domain-containing protein; Unnamed protein product; Similar to bacteriophage exonuclease.
   
    0.554
plu0034
Collar domain-containing protein; Unnamed protein product; Some similarities with putative alternative tail fiber protein of bacteriophage-related plasmid and bacteriophage.
      
 0.526
5s
5S ribosomal RNA; Unnamed protein product; Similar to unknown protein of Escherichia coli O157:H7.
      
 0.526
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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