STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu0021Collar domain-containing protein; Unnamed protein product; Similar to protein H (gpH) of Enterobacteria phage P2. (375 aa)    
Predicted Functional Partners:
plu0022
Unnamed protein product; Similar to protein I (gpI) of Enterobacteria phage P2.
 
  
 0.981
plu0023
Baseplate_J domain-containing protein; Unnamed protein product; Similar to protein J (gpJ) of Enterobacteria phage P2.
 
  
 0.980
plu0024
GPW_gp25 domain-containing protein; Unnamed protein product; Similar to protein W (gpW) of Enterobacteria phage P2.
 
  
 0.978
plu0025
Phage_base_V domain-containing protein; Unnamed protein product; Similar to protein V (gpV) of Enterobacteria phage P2.
 
  
 0.976
plu0010
Unnamed protein product; Similar to protein U (gpU) of Enterobacteria phage P2.
 
  
 0.942
plu0026
Unnamed protein product; Highly similar to tail protein.
 
    0.939
plu0019
Unnamed protein product; Similar to tail fiber assembly protein from bacteriophage.
 
  
 0.929
plu3424
Baseplate_J domain-containing protein; Unnamed protein product; Highly similar to phage-related baseplate assembly protein.
 
  
 0.917
plu3427
Unnamed protein product; Highly similar to hypothetical protein and some similarities with bacteriophage P2 protein D (gpD).
 
    0.916
plu0009
Unnamed protein product; Similar to protein D (gpD) of Enterobacteria phage P2.
 
    0.912
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.